セルビブリオ科
セルビブリオ科 | |||||||||||||||
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分類 | |||||||||||||||
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学名 | |||||||||||||||
Cellvibrionaceae Spring et al. 2015[1] (IJSEMリストに掲載 2015)[2] | |||||||||||||||
タイプ属 | |||||||||||||||
セルビブリオ属 Cellvibrio (ex Winogradsky 1929) Blackall et al. 1986[3] (IJSEMリストに掲載 1986)[4] 修正 Humphry et al. 2003[5] (IJSEMリストに掲載 2003)[6] 修正 Suarez et al. 2014[7] (IJSEMリストに掲載 2014)[8] | |||||||||||||||
下位分類(属) | |||||||||||||||
本文を参照 |
セルビブリオ科(セルビブリオか、Cellvibrionaceae)は、真正細菌Pseudomonadota門ガンマプロテオバクテリア綱セルビブリオ目の科の一つである[9]。偏性好気性グラム陰性非胞子形成性桿菌。海洋細菌であり、低度の好塩性である。ただしタイプ属のセルビブリオ属は陸上を起源とし、土壌及び植物由来のバイオマスの分解及び腐敗に関与する。2004年にChoとGiovannoniによって定義されたOMG(oligotrophic marine gammaproteobacteria:貧栄養性海洋ガンマプロテオバクテリア)グループ[10]をSpringらが遺伝学的アプローチで更に分析した結果、セルビブリオ目とともに同科が提案された[1]。セルビブリオ科のほとんどの種はそのゲノムに数十個のCAZyme(糖質活性酵素)遺伝子を有しており、セルロース、アガロース、カラギーナン、キシラン、デンプン、キチンなどの多糖類を加水分解する能力を備える。そのため、海洋環境における難生分解性の多糖類の分解及び他の生物が利用可能なバイオマスへの変換を行い、海洋炭素循環に役割を演じると考えられている。沿岸部の海水中や干潟の堆積物など様々な環境から見出されているが、真核生物から最も多く発見されている。木材を穿孔する軟体動物Lyrodus pedicellatus(木喰二枚貝)のエラからTeredinibacter turneraeが[11]、海藻を摂食するHaliotis discus hannai(エゾアワビ)の糞からAgaribacterium haliotisが[12]、Halimeda属緑色大型海藻からMarinibactrum halimedaeが[13]、造礁サンゴIsopora paliferaからPseudoteredinibacter isoporaeが[14]、フサコケムシBugula neritinaからCandidatus Endobugula sertulaが[15]、Tricleocarpa属サンゴモからExilibacterium tricleocarpaeが[16]、キサゴUmbonium costatumからUmboniibacter marinipuniceusが[17]それぞれ発見されている。Teredinibacter turneraeは窒素固定能を持つ[11]。GC含量は44~58 mol%である[1]。ほとんどのメンバーの細胞脂肪酸パターンでは、不飽和脂肪酸(C16:1、C18:1、或いはC17:1)が優勢である[1]。
下位分類(属)
[編集]セルビブリオ科は以下の属を含む(2024年10月現在)[9]。
IJSEMに正式承認されている属
[編集]- Agaribacterium
- Agarilytica
- Cellvibrio セルビブリオ属
- Eionea
- Exilibacterium
- Gilvimarinus
- Halioxenophilus
- Maricurvus
- Marinimicrobium マリニミクロビウム属
- Lim et al. 2006[36] (IJSEMリストに掲載 2006)[37]、修正 Yoon et al. 2009[38] (IJSEMリストに掲載 2009)[39]、修正 Song et al. 2019[40] (IJSEMリストに掲載 2019)[41]
- 偏性好気性耐塩性菌。干潟堆積物から発見されたMarinimicrobium koreense(マリニミクロビウム・コーリエンス)やMarinimicrobium agarilyticum(マリニミクロビウム・アガリライティカム)[36]、天日塩田から発見されたMarinimicrobium locisalis[38]、soda lake付近の土壌から発見された細菌Marinimicrobium alkaliphilum[40]などを含む。
- Pseudomaricurvus
- Pseudoteredinibacter シュードテレジニバクター属
- Saccharophagus サッカロファグス属
- Sessilibacter
- Simiduia
- Teredinibacter テレジニバクター属
- Thalassocella
- Umboniibacter
IJSEMに未承認の属
[編集]- "Candidatus Endobugula"
- "Teredinobacter" テレジノバクター属
- Ahuja 2000[66]
- Teredinibacterのシノニムである。
脚注
[編集]- ^ a b c d Stefan Spring 1, Carmen Scheuner 1, Markus Göker 1, Hans-Peter Klenk 2 (1: Department Microorganisms, Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures Braunschweig, Germany, 2: Department Microorganisms, Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures Braunschweig, Germany ; School of Biology, Newcastle University Newcastle upon Tyne, UK) (2015). “A taxonomic framework for emerging groups of ecologically important marine gammaproteobacteria based on the reconstruction of evolutionary relationships using genome-scale data”. Front Microbiol 6: 281. doi:10.3389/fmicb.2015.00281. PMC 4391266. PMID 25914684 .
- ^ Aharon Oren, George M. Garrity (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, Givat Ram, 91904 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 July 2015). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology: 2017-2025. doi:10.1099/ijs.0.000317.
- ^ a b Linda L. Blackall, A.C. Hayward, L.I. Sly (July 1985). “Cellulolytic and dextranolytic Gram-negative bacteria: revival of the genus Cellvibrio”. Journal of Applied Bacteriology 59 (1): 81-97. doi:10.1111/j.1365-2672.1985.tb01779.x.
- ^ a b “Validation of the Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB”. International Journal of Systematic and Evolutionary Microbiology 36 (2): 354-356. (01 April 1986). doi:10.1099/00207713-36-2-354.
- ^ a b David R. Humphry1, Gary W. Black2 and Stephen P. Cummings1 (1: The School of Health, Natural and Social Sciences, University of Sunderland, Sunderland SR1 3SD, UK, 2: School of Applied Sciences, Northumbria University, Ellison Building, Newcastle upon Tyne NE1 8ST, UK) (01 March 2003). “Reclassification of ‘Pseudomonas fluorescens subsp. cellulosa’ NCIMB 10462 (Ueda et al. 1952) as Cellvibrio japonicus sp. nov. and revival of Cellvibrio vulgaris sp. nov., nom. rev. and Cellvibrio fulvus sp. nov., nom. rev.”. International Journal of Systematic and Evolutionary Microbiology 53 (2): 393-400. doi:10.1099/ijs.0.02271-0. PMID 12710603.
- ^ a b “Notification that new names and new combinations have appeared in volume 53, part 2, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 53 (4). (01 July 2003). doi:10.1099/ijs.0.02848-0.
- ^ a b Christian Suarez1, Stefan Ratering1,†, Irina Kramer1 and Sylvia Schnell1 (1: Institute of Applied Microbiology, IFZ, Justus-Liebig University Giessen, 35392 Giessen, Germany, †: Present address: Fraunhofer ISC, Project Group IWKS, Brentano Strasse 2, 63457 Alzenau, Germany) (01 February 2014). “Cellvibrio diazotrophicus sp. nov., a nitrogen-fixing bacteria isolated from the rhizosphere of salt meadow plants and emended description of the genus Cellvibrio”. International Journal of Systematic and Evolutionary Microbiology 64 (Pt_2): 481-486. doi:10.1099/ijs.0.054817-0. PMID 24105943.
- ^ a b Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, Givat Ram, 91904 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 May 2014). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 64, part 2, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 64 (Pt_5). doi:10.1099/ijs.0.063446-0.
- ^ a b Jean P. Euzéby, Aidan C. Parte. “Cellvibrionaceae”. List of Prokaryotic names with Standing in Nomenclature (LPSN). 2024年10月26日閲覧。
- ^ Jang-Cheon Cho 1, Stephen J Giovannoni (1 Department of Microbiology, Oregon State University, Corvallis, Oregon 97331, USA) (1 January 2004). “Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria”. Applied and Environmental Microbiology 70 (1): 432-40. doi:10.1128/AEM.70.1.432-440.2004. PMC 321273. PMID 14711672 .
- ^ a b c d e Daniel L Distel, Wendy Morrill, Noelle MacLaren-Toussaint, Dianna Franks and John Waterbury (1 Department of Biochemistry, Microbiology, and Molecular Biology, University of Maine, 5735 Hitchner Hall, Orono, ME 04469-5735, USA) (01 November 2002). “Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae)”. International Journal of Systematic and Evolutionary Microbiology 52 (6): 2261-2269. doi:10.1099/00207713-52-6-2261. PMID 12508896.
- ^ a b c Zhaobin Huang1,2, Qiliang Lai2, Demin Zhang1 and Zongze Shao2 (1: School of Marine Sciences, Ningbo University, Ningbo 315211, PR China, 2: State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA; Key Laboratory of Marine Genetic Resources of Fujian Province, Xiamen 361005, PR China) (01 October 2017). “Agaribacterium haliotis gen. nov., sp. nov., isolated from abalone faeces”. International Journal of Systematic and Evolutionary Microbiology 67 (10): 3819-3823. doi:10.1099/ijsem.0.002199. PMID 28901895.
- ^ Miyuki Nishijima1,2, Kyoko Adachi1,3, Hiroshi Sano1,3 and Kazuhide Yamasato1,3 (1 Marine Biotechnology Institute (closed June 2008) ; 2 TechnoSuruga Laboratory Co., Ltd, 330, Nagasaki, Shimizu-ku, Shizuoka 424-0065, Japan *Correspondence: Miyuki Nishijima) (01 November 2015). “Marinibactrum halimedae gen. nov., sp. nov., a gammaproteobacterium isolated from a marine macroalga”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_11): 3866-3871. doi:10.1099/ijsem.0.000502. PMID 28875922.
- ^ a b c Ming-Hui Chen1, Shih-Yi Sheu2, A. B. Arun3, Chiu-Chung Young4, Chaolun Allen Chen5, Jih-Terng Wang6 and Wen-Ming Chen1 (1 Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung Marine University, No. 142, Hai-Chuan Rd, Nan-Tzu, Kaohsiung City 811, Taiwan ; 2 Department of Marine Biotechnology, National Kaohsiung Marine University, Kaohsiung, Taiwan ; 3 Yenepoya Research Center, Yenepoya University, Deralakatee, Mangalore, Karnataka, India ; 4 Department of Soil Environmental Science, College of Agriculture and Natural Resources, National Chung Hsing University, Taichung, Taiwan ; 5 Research Center for Biodiversity, Academia Sinica, Nangang 115, Taipei, Taiwan ; 6 Institute of Biotechnology, Tajen University, Yanpu, Pingtung 907, Taiwan *Correspondence: Wen-Ming Chen) (01 August 2011). “Pseudoteredinibacter isoporae gen. nov., sp. nov., a marine bacterium isolated from the reef-building coral Isopora palifera”. International Journal of Systematic and Evolutionary Microbiology 61 (8): 1887-1893. doi:10.1099/ijs.0.024190-0. PMID 20833889.
- ^ a b Ian J Miller 1, Niti Vanee 2, Stephen S Fong 2, Grace E Lim-Fong 3, Jason C Kwan 4 (1 Pharmaceutical Sciences Division, University of Wisconsin-Madison, Madison, Wisconsin, USA. ; 2 Department of Chemical and Life Science Engineering, Virginia Commonwealth University, Richmond, Virginia, USA. ; 3 Department of Biology, Randolph-Macon College, Ashland, Virginia, USA. ; 4 Pharmaceutical Sciences Division, University of Wisconsin-Madison, Madison, Wisconsin, USA) (27 October 2016). “Lack of Overt Genome Reduction in the Bryostatin-Producing Bryozoan Symbiont "Candidatus Endobugula sertula"”. Applied and Environmental Microbiology 82 (22). doi:10.1128/AEM.01800-16. PMC 5086551. PMID 27590822 .
- ^ a b c Guanghua Wang1,2,3, Xinfeng Zheng1,2,3, Shuailiang Xu1, Ge Dang1,2,3, Hongfei Su1,2,3, Zhiheng Liao1,2,3, Biao Chen1,2,3, Wen Huang1,2,3, Jiayuan Liang1,2,3 and Kefu Yu1,2,3 (1: Guangxi Key Laboratory on the Study of Coral Reefs in the South China Sea, Nanning 530004, PR China, 2: Coral Reef Research Center of China, Guangxi University, Nanning 530004, PR China, 3: School of Marine Sciences, Guangxi University, Nanning 530004, PR China) (04 May 2020). “Exilibacterium tricleocarpae gen. nov., sp. nov., a marine bacterium from coralline algae Tricleocarpa sp.”. International Journal of Systematic and Evolutionary Microbiology 70 (5): 3427-3432. doi:10.1099/ijsem.0.004189. PMID 32375976.
- ^ a b Lyudmila A. Romanenko1, Naoto Tanaka2 and Galina M. Frolova1 (1 Pacific Institute of Bioorganic Chemistry, Far-Eastern Branch, Russian Academy of Sciences, 690022 Vladivostok, Prospect 100 Let Vladivostoku, 159, Russia ; 2 NODAI Culture Collection Center, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan *Correspondence: Lyudmila A. Romanenko) (01 March 2010). “Umboniibacter marinipuniceus gen. nov., sp. nov., a marine gammaproteobacterium isolated from the mollusc Umbonium costatum from the Sea of Japan”. International Journal of Systematic and Evolutionary Microbiology 60 (3): 603-609. doi:10.1099/ijs.0.010728-0. PMID 19654350.
- ^ a b Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 91904 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 January 2018). “Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 67, part 10, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 68 (1): 3-6. doi:10.1099/ijsem.0.002462.
- ^ a b Si-Kai Ling1, Jun Xia1, Yan Liu1, Guan-Jun Chen1,2 and Zong-Jun Du1,2 (1: College of Marine Science, Shandong University, Weihai 264209, PR China, 2: State key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China) (01 October 2017). “Agarilytica rhodophyticola gen. nov., sp. nov., isolated from Gracilaria blodgettii”. International Journal of Systematic and Evolutionary Microbiology 67 (10): 3778-3783. doi:10.1099/ijsem.0.002193. PMID 28879838.
- ^ a b Laurent Urios1,2, Laurent Intertaglia1,2, Françoise Lesongeur3 and Philippe Lebaron1,2 (1: Université Pierre et Marie Curie-Paris 6, Laboratoire ARAGO, Avenue Fontaulé, F-66650 Banyuls-sur-Mer, France, 2: CNRS, UMR 7621, Laboratoire d’Océanographie Microbienne, Avenue Fontaulé, F-66650 Banyuls-sur-Mer, France, 3: Laboratoire de Microbiologie des Environnements Extrêmes, UMR 6197, IFREMER, Centre de Brest, BP70, F-29280 Plouzané, France) (01 July 2011). “Eionea nigra gen. nov., sp. nov., a gammaproteobacterium from the Mediterranean Sea”. International Journal of Systematic and Evolutionary Microbiology 61 (7): 1677-1681. doi:10.1099/ijs.0.023952-0. PMID 20729310.
- ^ “Notification that new names and new combinations have appeared in volume 61, part 7, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 61 (10): 2331-2332. (01 October 2011). doi:10.1099/ijs.0.036657-0.
- ^ Kiwoon Baek1, Ahyoung Choi1 and Jang-Cheon Cho1 (1: Department of Biological Sciences, Inha University, Incheon 402-751, Republic of Korea) (01 September 2015). “Eionea flava sp. nov., isolated from coastal seawater, and emended description of the genus Eionea”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_9): 2975-2979. doi:10.1099/ijs.0.000366. PMID 26025942.
- ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 91904 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 December 2015). “Notification that novel names of prokaryotes, novel combinations, and new taxonomic opinions have appeared in volume 65, part 9, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_12): 4294-4296. doi:10.1099/ijsem.0.000701.
- ^ Aharon Oren1ORCID icon and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (26 August 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 5 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (8): 4421-4424. doi:10.1099/ijsem.0.004291.
- ^ a b c Zong-Jun Du1, De-Chao Zhang2, Song-Nian Liu1, Ji-Xiang Chen2, Xiang-Li Tian2, Zhi-Nan Zhang2, Hong-Can Liu3 and Guan-Jun Chen1,4 (1: College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China, 2: Division of Life Science and Technology, Ocean University of China, Qingdao 266003, PR China, 3: China General Microbiological Culture Collection Center and State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China, 4: State Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China) (01 December 2009). “Gilvimarinus chinensis gen. nov., sp. nov., an agar-digesting marine bacterium within the class Gammaproteobacteria isolated from coastal seawater in Qingdao, China”. International Journal of Systematic and Evolutionary Microbiology 59 (12): 2987-90. doi:10.1099/ijs.0.001313-0. PMID 19643907.
- ^ “Notification that new names and new combinations have appeared in volume 59, part 12, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 60 (3): 473-474. (01 March 2010). doi:10.1099/ijs.0.022673-0.
- ^ a b c Hong Cheng1, Shun Zhang1, Ying-Yi Huo2, Xia-Wei Jiang3, Xin-Qi Zhang4, Jie Pan1, Xu-Fen Zhu1 and Min Wu1 (1: College of Life Sciences, Zhejiang University, Hangzhou 310058, PR China, 2: Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, State Oceanic Administration, Hangzhou 310012, PR China, 3: State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, the First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou 310003, PR China, 4: School of Forestry and Biotechnology, Zhejiang Agriculture & Forestry University, Linan 311300, PR China) (01 February 2015). “Gilvimarinus polysaccharolyticus sp. nov., an agar-digesting bacterium isolated from seaweed, and emended description of the genus Gilvimarinus”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_2): 562-569. doi:10.1099/ijs.0.065078-0. PMID 25392347.
- ^ Aharon Oren1 and George M. Garrity2 (01 May 2015). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 65, part 2, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_5): 1397-1399. doi:10.1099/ijs.0.000142.
- ^ Byung-Chun Kim 1, Mi Na Kim, Kang Hyun Lee, Hyun Soon Kim, Sung Ran Min, Kee-Sun Shin (Microbiological Resources Center, KRIBB, Daejeon, Republic of Korea). “Gilvimarinus agarilyticus sp. nov., a new agar-degrading bacterium isolated from the seashore of Jeju Island”. Antonie van Leeuwenhoek 100 (1): 67–73. doi:10.1007/s10482-011-9565-2. PMID 21340651.
- ^ Yan-Jiao Zhang 1, Hai-Ning Sun 2 3, Ting-Ting Xu 2, Dian-Li Zhao 4, Chun-Mei Yu 2, Yi Zhang 3, Xi-Ying Zhang 2, Xiu-Lan Chen 2 3, Yu-Qiang Zhang 2, Fang Zhao 2 (1 Shandong Province Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, Qingdao, China. ; 2 State Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, China. ; 3 College of Marine Life Sciences & Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, China. ; 4 Laboratory for Marine Biology and Biotechnology, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, China.) (24 October 2022). “Gilvimarinus xylanilyticus sp. nov., a novel 1,3-xylanase-secreting bacterium isolated from a marine green alga”. Frontiers in Microbiology 13: 1006116. doi:10.3389/fmicb.2022.1006116. PMC 9638140. PMID 36353462 .
- ^ Hideyuki Kouzui1, Koki Tokikawa2, Masataka Satomi3, Takumi Negoro4, Katsuya Shimabukuro4 and Katsuhiko Fujii1,2 (1 Department of Agriculture, Graduate School of Science and Technology for Innovation, Yamaguchi University, Yoshida, Yamaguchi 753-8515, Japan ; 2 Faculty of Agriculture, Yamaguchi University, Yoshida, Yamaguchi 753-8515, Japan ; 3 National Research Institute of Fisheries Science, Japan Fisheries Research and Education Agency, Kanazawa, Yokohama 236-8648, Japan ; 4 Department of Chemical and Biological Engineering, National Institute of Technology, Ube College, Tokiwadai, Ube, Yamaguchi 755-8555, Japan *Correspondence: Katsuhiko Fujii) (01 December 2016). “Gilvimarinus japonicus sp. nov., a cellulolytic and agarolytic marine bacterium isolated from coastal debris”. International Journal of Systematic and Evolutionary Microbiology 66 (12): 5417-5423. doi:10.1099/ijsem.0.001534. PMID 27692037.
- ^ a b Hiroaki Iwaki, Taisei Yamamoto, Yoshie Hasegawa (Department of Life Science & Biotechnology, Kansai University, 3-3-35 Yamate-cho, Suita, Osaka 564-8680, Japan) (16 February 2018). “Isolation of marine xylene-utilizing bacteria and characterization of Halioxenophilus aromaticivorans gen. nov., sp. nov. and its xylene degradation gene cluster”. FEMS Microbiology Letters 365 (7): fny042. doi:10.1093/femsle/fny042. PMID 29462302.
- ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel, 2: Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (23 October 2018). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 68 (11). doi:10.1099/ijsem.0.003071.
- ^ a b Hiroaki Iwaki 1, Kengo Takada, Yoshie Hasegawa (1: Department of Life Science & Biotechnology and ORDIST, Kansai University, Suita, Japan) (01 February 2012). “Maricurvus nonylphenolicus gen. nov., sp. nov., a nonylphenol-degrading bacterium isolated from seawater”. FEMS Microbiology Letters 327 (2): 142–147. doi:10.1111/j.1574-6968.2011.02471.x. PMID 22133150.
- ^ “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 62 (Pt_5): 1017-1019. (01 May 2012). doi:10.1099/ijs.0.043240-0.
- ^ a b Jee-Min Lim1, Che Ok Jeon2, Jae-Chan Lee1, Sung-Min Song1,3, Kwang-Yup Kim3 and Chang-Jin Kim1 (1 Korea Research Institute of Bioscience and Biotechnology, 52 Oeundong, Yusong, Daejeon 305-333, Republic of Korea ; 2 Environmental Biotechnology National Core Research Center, PMBBRC, Division of Environmental Biotechnology, Gyeongsang National University, 660-701, Republic of Korea ; 3 Department of Food Science and Technology, Chungbuk National University, Cheongju 361-763, Republic of Korea *Correspondence: Chang-Jin Kim) (01 March 2006). “Marinimicrobium koreense gen. nov., sp. nov. and Marinimicrobium agarilyticum sp. nov., novel moderately halotolerant bacteria isolated from tidal flat sediment in Korea”. International Journal of Systematic and Evolutionary Microbiology 56 (3): 653-657. doi:10.1099/ijs.0.64075-0. PMID 16514044.
- ^ “Notification that new names and new combinations have appeared in volume 56, part 3, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 56 (6): 1181-1182. (01 June 2006). doi:10.1099/ijs.0.64388-0.
- ^ a b Jung-Hoon Yoon1, So-Jung Kang1, Yong-Taek Jung1 and Tae-Kwang Oh1 (1 Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Republic of Korea *Correspondence: Jung-Hoon Yoon) (01 September 2009). “Marinimicrobium locisalis sp. nov., isolated from a marine solar saltern, and emended description of the genus Marinimicrobium”. International Journal of Systematic and Evolutionary Microbiology 59 (9): 2260-3. doi:10.1099/ijs.0.008458-0. PMID 19620360.
- ^ “Notification that new names and new combinations have appeared in volume 59, part 9, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 59 (12): 2921-2922. (01 December 2009). doi:10.1099/ijs.0.019802-0.
- ^ a b Lei Song1, Hongcan Liu1, Shichun Cai1 and Yuguang Zhou1 (1 China General Microbiological Culture Collection Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China *Correspondence: Yuguang Zhou) (19 December 2018). “Marinimicrobium alkaliphilum sp. nov., an alkaliphilic bacterium isolated from soil and emended description of the genus Marinimicrobium”. International Journal of Systematic and Evolutionary Microbiology 69 (2): 481-485. doi:10.1099/ijsem.0.003183. PMID 30566073.
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (28 February 2019). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 69, part 2 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 69 (5): 1251-1252. doi:10.1099/ijsem.0.003310.
- ^ a b Hiroaki Iwaki 1, Makoto Fujioka, Yoshie Hasegawa (1 Department of Life Science and Biotechnology, Kansai University, 3-3-35 Yamate-cho, Suita, Osaka, 564-8680, Japan) (20 September 2013). “Isolation and characterization of marine nonylphenol-degrading bacteria and description of Pseudomaricurvus alkylphenolicus gen. nov., sp. nov.”. Current Microbiology 68 (2): 167-173. doi:10.1007/s00284-013-0455-x. PMID 24051555.
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, 91904 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 May 2014). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 64 (Pt_5): 1455-1458. doi:10.1099/ijs.0.064402-0.
- ^ a b Hyun-Seok Seo1, Sung-Hyun Yang1, Ji Hye Oh1, Jung-Hyun Lee1,2 and Kae Kyoung Kwon1,2 (1 Marine Biotechnology Research Division, Korea Institute of Ocean Science and Technology, South Korea : 2 Department of Marine Biotechnology, Korea University of Science and Technology, Daejeon, South Korea *Correspondence: Kae Kyoung Kwon) (01 October 2015). “Pseudomaricurvus alcaniphilus sp. nov., a marine bacterium isolated from tidal flat sediment and emended descriptions of the genus Pseudomaricurvus, Pseudomaricurvus alkylphenolicus Iwaki et al. 2014 and Maricurvus nonylphenolicus Iwaki et al. 2012”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_10): 3591-3596. doi:10.1099/ijsem.0.000463. PMID 26297504.
- ^ Aharon Oren1 and George M. Garrity2 (1Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, 91904 Jerusalem, Israel ; 2Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 January 2016). “Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 65, part 10, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 66 (1): 4-6. doi:10.1099/ijsem.0.000745.
- ^ “Notification that new names and new combinations have appeared in volume 61, part 8, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 61 (11): 2566-2567. (01 November 2011). doi:10.1099/ijs.0.037903-0.
- ^ a b Nathan A. Ekborg1, Jose M. Gonzalez2, Michael B. Howard1, Larry E. Taylor3, Steven W. Hutcheson1 and Ronald M. Weiner1 (1 Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA ; 2 Department of Microbiology and Cell Biology, University of La Laguna, 38206 La Laguna, Tenerife, Spain ; 3 Department of Marine Estuarine Environmental Sciences, College Park, MD 20742, USA *Correspondence: Ronald M. Weiner) (01 July 2005). “Saccharophagus degradans gen. nov., sp. nov., a versatile marine degrader of complex polysaccharides”. International Journal of Systematic and Evolutionary Microbiology 55 (4): 1545-1549. doi:10.1099/ijs.0.63627-0. PMID 16014479.
- ^ “Notification that new names and new combinations have appeared in volume 55, part 4, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 55 (6): 2239-2241. (01 November 2005). doi:10.1099/ijs.0.64072-0.
- ^ a b Jianfeng Liu1, Jin Li2, Jixin Luo2, Yuanjin Li2, Zian Yang2, Chengli Huang2, Feilong Sun2 and Guanghua Wang1 (1 Guangxi Key Laboratory on the Study of Coral Reefs in the South China Sea, Nanning 530004, PR China ; 2 School of Marine Sciences, Guangxi University, Nanning 530004, PR China *Correspondence: Guanghua Wang) (31 May 2022). “Sessilibacter corallicola gen. nov., sp. nov., a sessile bacterium isolated from coral Porites lutea”. International Journal of Systematic and Evolutionary Microbiology 72 (5): 5401. doi:10.1099/ijsem.0.005401. PMID 35639595.
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (30 August 2022). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 72, part 5 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 72 (8): 5476. doi:10.1099/ijsem.0.005476.
- ^ Wung Yang Shieh1, Tung Yen Liu1, Silk Yu Lin1, Wen Dar Jean2 and Jwo-Sheng Chen3 (1 Institute of Oceanography, National Taiwan University, PO Box 23-13, Taipei, Taiwan ; 2 Center for General Education, Leader University, No. 188, Sec. 5, An-Chung Rd, Tainan, Taiwan ; 3 College of Health Care, China Medical University, No. 91, Shyue-Shyh Rd, Taichung, Taiwan *Correspondence: Wung Yang Shieh) (01 April 2008). “Simiduia agarivorans gen. nov., sp. nov., a marine, agarolytic bacterium isolated from shallow coastal water from Keelung, Taiwan”. International Journal of Systematic and Evolutionary Microbiology 58 (4): 895-900. doi:10.1099/ijs.0.65371-0. PMID 18398190.
- ^ “Notification that new names and new combinations have appeared in volume 58, part 4, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 58 (7): 1513-1514. (01 July 2008). doi:10.1099/ijs.0.2008/004069-0.
- ^ Sooyeon Park1,†, Soo-In Kim1,†, Yong-Taek Jung1 and Jung-Hoon Yoon1 (1 Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea †Correspondence: Jung-Hoon Yoon † These authors contributed equally to this work.) (01 November 2014). “Simiduia curdlanivorans sp. nov., a curdlan-degrading bacterium isolated from the junction between the ocean and a freshwater spring, and emended description of the genus Simiduia”. International Journal of Systematic and Evolutionary Microbiology 64 (Pt_11): 3695-3700. doi:10.1099/ijs.0.065334-0. PMID 25106923.
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, Givat Ram, 91904 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, U.S.A. *Correspondence: Aharon Oren) (01 February 2015). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 64, part 11, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_2): 323-324. doi:10.1099/ijs.0.000017.
- ^ a b “Notification that new names and new combinations have appeared in volume 52, part 6, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 53 (2): 375-376. (01 March 2003). doi:10.1099/ijs.0.02704-0.
- ^ Marvin A Altamia 1, J Reuben Shipway 1 2, David Stein 1, Meghan A Betcher 3, Jennifer M Fung 4, Guillaume Jospin 5, Jonathan Eisen 5, Margo G Haygood 6, Daniel L Distel 1 (1 Ocean Genome Legacy Center, Northeastern University, Nahant, MA, USA. ; 2 School of Biological Sciences, University of Portsmouth, Portsmouth, UK. ; 3 Downstream Strategies, Alderson, WV, USA. ; 4 Mendel Biotechnology, Hayworth, CA, USA. ; 5 College of Biological Sciences, University of California, Davis, CA, USA. ; 6 Department of Medicinal Chemistry, College of Pharmacy, University of Utah, UT, USA. *Correspondence: Daniel L. Distel) (20 February 2020). “Teredinibacter waterburyi sp. nov., a marine, cellulolytic endosymbiotic bacterium isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended description of the genus Teredinibacter”. International Journal of Systematic and Evolutionary Microbiology 70 (4): 2388-2394. doi:10.1099/ijsem.0.004049. PMC 7395619. PMID 32100688 .
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (30 July 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 4 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 4050-4060. doi:10.1099/ijsem.0.004260.
- ^ Marvin A Altamia 1, J Reuben Shipway 2 3, David Stein 1, Meghan A Betcher 4, Jennifer M Fung 5, Guillaume Jospin 6, Jonathan Eisen 6, Margo G Haygood 7, Daniel L Distel 1 (1 Ocean Genome Legacy Center, Northeastern University, Nahant, MA, USA. ; 2 The Centre for Enzyme Innovation, University of Portsmouth, Portsmouth, UK. ; 3 Department of Microbiology, University of Massachusetts, Amherst, MA, USA. ; 4 Downstream Strategies, Alderson, WV, USA. ; 5 Perfect Day, Emeryville, CA, USA. ; 6 College of Biological Sciences, University of California, Davis, CA, USA. ; 7 Department of Medicinal Chemistry, College of Pharmacy, University of Utah, UT, USA. *Correspondence: Daniel L. Distel) (13 January 2021). “Teredinibacter haidensis sp. nov., Teredinibacter purpureus sp. nov. and Teredinibacter franksiae sp. nov., marine, cellulolytic endosymbiotic bacteria isolated from the gills of the wood-boring mollusc Bankia setacea (Bivalvia: Teredinidae) and emended description of the genus Teredinibacter”. International Journal of Systematic and Evolutionary Microbiology 71 (2): 004627. doi:10.1099/ijsem.0.004627. PMC 8346767. PMID 33439117 .
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (02 June 2021). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 71, part 2 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 71 (5): 4766. doi:10.1099/ijsem.0.004766.
- ^ a b Teresa Lucena 1, David R Arahal 1, Isabel Sanz-Sáez 2, Silvia G Acinas 2, Olga Sánchez 3, Rosa Aznar 1, Carlos Pedrós-Alió 4, María J Pujalte 1 (1 Departamento de Microbiología y Ecología and Colección Española de Cultivos Tipo (CECT), Universitat de València, Valencia, Spain ; 2 Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, ICM-CSIC, Barcelona, Spain ; 3 Departament de Genètica i Microbiologia, Facultat de Biociències, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain ; 4 Department of Systems Biology, Centro Nacional de Biotecnología (CNB), CSIC, Madrid, Spain *Correspondence: María J. Pujalte) (03 December 2019). “Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae”. International Journal of Systematic and Evolutionary Microbiology 70 (2): 1231-1239. doi:10.1099/ijsem.0.003906. PMID 31793854.
- ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (29 May 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 2 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (5): 2967-2971. doi:10.1099/ijsem.0.004148.
- ^ “Notification that new names and new combinations have appeared in volume 60, part 3, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 60 (6): 1253-1255. (01 June 2010). doi:10.1099/ijs.0.025270-0.
- ^ a b M G Haygood 1, S K Davidson (1 Marine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla 92093-0202, USA) (1 November 1997). “Small-subunit rRNA genes and in situ hybridization with oligonucleotides specific for the bacterial symbionts in the larvae of the bryozoan Bugula neritina and proposal of "Candidatus endobugula sertula"”. Applied and Environmental Microbiology 63 (11). doi:10.1128/aem.63.11.4612-4616.1997. PMC 168781. PMID 9361448 .
- ^ Aharon Oren1, George M. Garrity2,3, Charles T. Parker3, Maria Chuvochina4 and Martha E. Trujillo5 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA ; 3 NamesforLife, LLC, PO Box 769, Okemos MI 48805-0769, USA ; 4 Australian Centre for Ecogenomics, University of Queensland, St. Lucia QLD 4072, Brisbane, Australia ; 5 Departamento de Microbiología y Genética, Campus Miguel de Unamuno, Universidad de Salamanca, 37007, Salamanca, Spain *Correspondence: Aharon Oren) (30 June 2020). “Lists of names of prokaryotic Candidatus taxa”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 3956-4042. doi:10.1099/ijsem.0.003789.
- ^ Grace E Lim 1, Margo G Haygood (1 Scripps Institution of Oceanography, Marine Biology Research Division, 0202, University of California, San Diego, La Jolla, CA 92093-0202, USA) (1 August 2004). “"Candidatus Endobugula glebosa," a specific bacterial symbiont of the marine bryozoan Bugula simplex”. Applied and Environmental Microbiology 70 (8). doi:10.1128/AEM.70.8.4921-4929.2004. PMC 492373. PMID 15294832 .
- ^ Ahuja S (2000). “Bioprocess engineering of Teredinobacter turnirae: Effect of morphology on metabolic activities of a marine bacterium”. Dissertation (University of Maryland, College Park).