「Neokaryotes」の版間の差分

Neokaryotes
	Amoeba proteus
分類
ドメイン:	真核生物Eukaryota
(階級なし):	Orthokaryotes
(階級なし):	Neokaryotes
下位分類
	ディアフォレティケス; Opimoda;

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インライン

2023年11月26日 (日) 15:20時点における版

Neokaryotes(Cavalier-Smith 1993）は、Jakobeaの姉妹群として、Opimodaとディアフォレティケスからなる真核生物のクレードである。

分類

Neokaryotesを含む真核生物の系統として以下が考えられている^[1]^[2]^[3]^[4]^[5]^[6]^[7]^[8]。

Tsukubea

Discicristata

	ユーグレノゾア

	Percolozoa

Orthokaryotes

Jakobea

Neokaryotes

Corticata/ディアフォレティケス/

アーケプラスチダ

クロミスタ

	ハクロビア

	SAR

バイコンタ

Scotokaryotes/Opimoda/Neozoa

メタモナダ

	Apusomonadida

	オピストコンタ/コアノゾア

ユニコンタ

Sarcomastigota

参考文献

^ Derelle, Romain; Torruella, Guifré; Klimeš, Vladimír; Brinkmann, Henner; Kim, Eunsoo; Vlček, Čestmír; Lang, B. Franz; Eliáš, Marek (2015-02-17). “Bacterial proteins pinpoint a single eukaryotic root” (英語). Proceedings of the National Academy of Sciences 112 (7). doi:10.1073/pnas.1420657112. ISSN 0027-8424.
^ Cavalier-Smith, Thomas; Chao, Ema E.; Snell, Elizabeth A.; Berney, Cédric; Fiore-Donno, Anna Maria; Lewis, Rhodri (2014-12). “Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa” (英語). Molecular Phylogenetics and Evolution 81: 71–85. doi:10.1016/j.ympev.2014.08.012.
^ Cavalier-Smith, Thomas (2010-06-23). “Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree” (英語). Biology Letters 6 (3): 342–345. doi:10.1098/rsbl.2009.0948. ISSN 1744-9561.
^ He, Ding; Fiz-Palacios, Omar; Fu, Cheng-Jie; Fehling, Johanna; Tsai, Chun-Chieh; Baldauf, Sandra L. (2014-02). “An Alternative Root for the Eukaryote Tree of Life” (英語). Current Biology 24 (4): 465–470. doi:10.1016/j.cub.2014.01.036.
^ Cavalier-Smith, Thomas (2013-05). “Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa” (英語). European Journal of Protistology 49 (2): 115–178. doi:10.1016/j.ejop.2012.06.001.
^ Hug, Laura A.; Baker, Brett J.; Anantharaman, Karthik; Brown, Christopher T.; Probst, Alexander J.; Castelle, Cindy J.; Butterfield, Cristina N.; Hernsdorf, Alex W. et al. (2016-04-11). “A new view of the tree of life” (英語). Nature Microbiology 1 (5). doi:10.1038/nmicrobiol.2016.48. ISSN 2058-5276.
^ Cavalier-Smith, Thomas; Chao, Ema E.; Lewis, Rhodri (2016-06). “187-gene phylogeny of protozoan phylum Amoebozoa reveals a new class (Cutosea) of deep-branching, ultrastructurally unique, enveloped marine Lobosa and clarifies amoeba evolution” (英語). Molecular Phylogenetics and Evolution 99: 275–296. doi:10.1016/j.ympev.2016.03.023.
^ Cavalier-Smith, Thomas (2018-01). “Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences” (英語). Protoplasma 255 (1): 297–357. doi:10.1007/s00709-017-1147-3. ISSN 0033-183X.

[1] Derelle, Romain; Torruella, Guifré; Klimeš, Vladimír; Brinkmann, Henner; Kim, Eunsoo; Vlček, Čestmír; Lang, B. Franz; Eliáš, Marek (2015-02-17). “Bacterial proteins pinpoint a single eukaryotic root” (英語). Proceedings of the National Academy of Sciences 112 (7). doi:10.1073/pnas.1420657112. ISSN 0027-8424.

[2] Cavalier-Smith, Thomas; Chao, Ema E.; Snell, Elizabeth A.; Berney, Cédric; Fiore-Donno, Anna Maria; Lewis, Rhodri (2014-12). “Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa” (英語). Molecular Phylogenetics and Evolution 81: 71–85. doi:10.1016/j.ympev.2014.08.012.

[3] Cavalier-Smith, Thomas (2010-06-23). “Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree” (英語). Biology Letters 6 (3): 342–345. doi:10.1098/rsbl.2009.0948. ISSN 1744-9561.

[4] He, Ding; Fiz-Palacios, Omar; Fu, Cheng-Jie; Fehling, Johanna; Tsai, Chun-Chieh; Baldauf, Sandra L. (2014-02). “An Alternative Root for the Eukaryote Tree of Life” (英語). Current Biology 24 (4): 465–470. doi:10.1016/j.cub.2014.01.036.

[5] Cavalier-Smith, Thomas (2013-05). “Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa” (英語). European Journal of Protistology 49 (2): 115–178. doi:10.1016/j.ejop.2012.06.001.

[6] Hug, Laura A.; Baker, Brett J.; Anantharaman, Karthik; Brown, Christopher T.; Probst, Alexander J.; Castelle, Cindy J.; Butterfield, Cristina N.; Hernsdorf, Alex W. et al. (2016-04-11). “A new view of the tree of life” (英語). Nature Microbiology 1 (5). doi:10.1038/nmicrobiol.2016.48. ISSN 2058-5276.

[7] Cavalier-Smith, Thomas; Chao, Ema E.; Lewis, Rhodri (2016-06). “187-gene phylogeny of protozoan phylum Amoebozoa reveals a new class (Cutosea) of deep-branching, ultrastructurally unique, enveloped marine Lobosa and clarifies amoeba evolution” (英語). Molecular Phylogenetics and Evolution 99: 275–296. doi:10.1016/j.ympev.2016.03.023.

[8] Cavalier-Smith, Thomas (2018-01). “Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences” (英語). Protoplasma 255 (1): 297–357. doi:10.1007/s00709-017-1147-3. ISSN 0033-183X.

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@@ 29行目: / 29行目: @@
 == 分類 ==
+Neokaryotesを含む真核生物の系統として以下が考えられている<ref>{{Cite journal|last=Derelle|first=Romain|last2=Torruella|first2=Guifré|last3=Klimeš|first3=Vladimír|last4=Brinkmann|first4=Henner|last5=Kim|first5=Eunsoo|last6=Vlček|first6=Čestmír|last7=Lang|first7=B. Franz|last8=Eliáš|first8=Marek|date=2015-02-17|title=Bacterial proteins pinpoint a single eukaryotic root|url=https://pnas.org/doi/full/10.1073/pnas.1420657112|journal=Proceedings of the National Academy of Sciences|volume=112|issue=7|language=en|doi=10.1073/pnas.1420657112|issn=0027-8424}}</ref><ref>{{Cite journal|last=Cavalier-Smith|first=Thomas|last2=Chao|first2=Ema E.|last3=Snell|first3=Elizabeth A.|last4=Berney|first4=Cédric|last5=Fiore-Donno|first5=Anna Maria|last6=Lewis|first6=Rhodri|date=2014-12|title=Multigene eukaryote phylogeny reveals the likely protozoan ancestors of opisthokonts (animals, fungi, choanozoans) and Amoebozoa|url=https://linkinghub.elsevier.com/retrieve/pii/S1055790314002796|journal=Molecular Phylogenetics and Evolution|volume=81|pages=71–85|language=en|doi=10.1016/j.ympev.2014.08.012}}</ref><ref>{{Cite journal|last=Cavalier-Smith|first=Thomas|date=2010-06-23|title=Kingdoms Protozoa and Chromista and the eozoan root of the eukaryotic tree|url=https://royalsocietypublishing.org/doi/10.1098/rsbl.2009.0948|journal=Biology Letters|volume=6|issue=3|pages=342–345|language=en|doi=10.1098/rsbl.2009.0948|issn=1744-9561}}</ref><ref>{{Cite journal|last=He|first=Ding|last2=Fiz-Palacios|first2=Omar|last3=Fu|first3=Cheng-Jie|last4=Fehling|first4=Johanna|last5=Tsai|first5=Chun-Chieh|last6=Baldauf|first6=Sandra L.|date=2014-02|title=An Alternative Root for the Eukaryote Tree of Life|url=https://linkinghub.elsevier.com/retrieve/pii/S0960982214000694|journal=Current Biology|volume=24|issue=4|pages=465–470|language=en|doi=10.1016/j.cub.2014.01.036}}</ref><ref>{{Cite journal|last=Cavalier-Smith|first=Thomas|date=2013-05|title=Early evolution of eukaryote feeding modes, cell structural diversity, and classification of the protozoan phyla Loukozoa, Sulcozoa, and Choanozoa|url=https://linkinghub.elsevier.com/retrieve/pii/S0932473912000508|journal=European Journal of Protistology|volume=49|issue=2|pages=115–178|language=en|doi=10.1016/j.ejop.2012.06.001}}</ref><ref>{{Cite journal|last=Hug|first=Laura A.|last2=Baker|first2=Brett J.|last3=Anantharaman|first3=Karthik|last4=Brown|first4=Christopher T.|last5=Probst|first5=Alexander J.|last6=Castelle|first6=Cindy J.|last7=Butterfield|first7=Cristina N.|last8=Hernsdorf|first8=Alex W.|last9=Amano|first9=Yuki|date=2016-04-11|title=A new view of the tree of life|url=https://www.nature.com/articles/nmicrobiol201648|journal=Nature Microbiology|volume=1|issue=5|language=en|doi=10.1038/nmicrobiol.2016.48|issn=2058-5276}}</ref><ref>{{Cite journal|last=Cavalier-Smith|first=Thomas|last2=Chao|first2=Ema E.|last3=Lewis|first3=Rhodri|date=2016-06|title=187-gene phylogeny of protozoan phylum Amoebozoa reveals a new class (Cutosea) of deep-branching, ultrastructurally unique, enveloped marine Lobosa and clarifies amoeba evolution|url=https://linkinghub.elsevier.com/retrieve/pii/S105579031630015X|journal=Molecular Phylogenetics and Evolution|volume=99|pages=275–296|language=en|doi=10.1016/j.ympev.2016.03.023}}</ref><ref>{{Cite journal|last=Cavalier-Smith|first=Thomas|date=2018-01|title=Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences|url=http://link.springer.com/10.1007/s00709-017-1147-3|journal=Protoplasma|volume=255|issue=1|pages=297–357|language=en|doi=10.1007/s00709-017-1147-3|issn=0033-183X}}</ref>。
 {{Clade|{{Clade
         |1='''[[Tsukubea]]'''